miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST045797
species: Triticum turgidum subsp. durum
source: microPC, original name: miR1439

Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGAACGGAGGGAGTA

miRNA*
 CTCCCTTCGCTCCAAAATA

mismatches: 1
bulges: 0
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pre-miRNA
 TACTCCCTTCGCTCCAAAATAGATGACCCAACTTTGTACTAAAGTTAATACAAAGTTGGTTCATCTATTTTGGAACGGAGGGAGTA

dot-bracket secondary structure
(((((((((((.((((((((((((((.(((((((((((.((....)).))))))))))).)))))))))))))).)))))))))))


SIMILARITIES
miRBase tae-MIR1137: 1e-24

PMRD tae-miR1137: 1e-24

microPC miR1439: 1e-43		UniProt no hits

RFAM MIR1122: 9e-26

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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